STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18708.1Glyoxylase, beta-lactamase superfamily II. (294 aa)    
Predicted Functional Partners:
SEF18709.1
Predicted dehydrogenase.
 
    0.927
SEF18707.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 
  0.859
SEF18714.1
Sugar phosphate isomerase/epimerase.
 
     0.787
SEF18702.1
Beta-xylosidase, GH43 family.
  
     0.768
SEE45509.1
Hypothetical protein.
  
 
  0.750
SEF17860.1
Adenylyltransferase and sulfurtransferase.
  
 0.737
SEF18703.1
Multiple sugar transport system substrate-binding protein.
  
     0.733
SEF18712.1
Myo-inositol catabolism protein IolC; Manually curated.
 
     0.726
SEF18239.1
NPCBM-associated, NEW3 domain of alpha-galactosidase.
  
     0.691
SEF18706.1
Galactose mutarotase.
  
     0.690
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.