STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18733.12-polyprenyl-6-methoxyphenol hydroxylase. (427 aa)    
Predicted Functional Partners:
SEF18719.1
Gentisate 1,2-dioxygenase.
 
  
 0.889
SEF18728.1
Catalytic LigB subunit of aromatic ring-opening dioxygenase.
 
  
  0.866
SEF18725.1
Regulator of RNase E activity RraA.
 
     0.819
SEF18724.1
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
 
     0.818
SEF18729.1
4-oxalmesaconate hydratase.
 
    0.818
SEF18726.1
Regulator of RNase E activity RraA.
 
     0.817
SEF18722.1
2,4-dichlorophenol 6-monooxygenase.
 
     0.810
SEF18727.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.773
SEF18730.1
iron(III) transport system substrate-binding protein.
       0.773
SEF18731.1
iron(III) transport system permease protein.
       0.773
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.