STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18893.1Aspartate ammonia-lyase. (434 aa)    
Predicted Functional Partners:
SEE71210.1
L-asparaginase.
 
 
 0.945
SEF09256.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 0.905
SED81015.1
Glutamate synthase (NADH) large subunit.
    
 0.896
SEF16185.1
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
 
 0.895
SEF17021.1
Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.
    
 0.881
SEE57115.1
[acyl-carrier-protein] S-malonyltransferase.
    
 0.878
SEE68141.1
Indolepyruvate ferredoxin oxidoreductase.
  
 0.874
SEF18033.1
2-oxoglutarate dehydrogenase E1 component.
    
 0.860
SEF18721.1
Malate dehydrogenase.
 
 
 0.858
SEF09108.1
Aspartate/methionine/tyrosine aminotransferase.
    
 0.842
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.