STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18917.1Ferredoxin. (63 aa)    
Predicted Functional Partners:
SEF18916.1
Reductase C-terminal.
 
  
 0.902
SEF18915.1
Cytochrome P450.
 
  
 0.899
SEF09256.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.835
SEF18914.1
Hypothetical protein.
 
     0.826
SEE17239.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.778
SEF18913.1
Acetyltransferase (GNAT) family protein.
       0.773
SEF18910.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
       0.628
SEF18911.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
       0.628
SEF18912.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
       0.628
SEF18909.1
Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain-containing protein.
       0.596
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.