STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEF18921.1Predicted arabinose efflux permease, MFS family. (413 aa)    
Predicted Functional Partners:
SEF16596.1
Predicted arabinose efflux permease, MFS family.
  
     0.678
SEF09449.1
Predicted arabinose efflux permease, MFS family.
  
     0.659
SEF10950.1
Predicted arabinose efflux permease, MFS family.
  
     0.627
SEF18922.1
Mechanosensitive ion channel.
       0.592
SEE58516.1
Major Facilitator Superfamily protein.
  
     0.540
SEE78757.1
Fucose permease.
  
     0.540
SEF16755.1
Predicted arabinose efflux permease, MFS family.
  
     0.522
SEF12273.1
Fucose permease.
  
     0.501
SEF15910.1
Diguanylate cyclase (GGDEF) domain-containing protein.
 
     0.459
SEE71898.1
Transmembrane secretion effector.
  
     0.457
Your Current Organism:
Jiangella alba
NCBI taxonomy Id: 561176
Other names: CCTCC AA 208023, DSM 45237, J. alba, JCM 16901, Jiangella alba Qin et al. 2009, Jiangella sp. YIM 61503, YIM 61503
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.