Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEE54882.1 | SEF18932.1 | SAMN04488561_1698 | SAMN04488561_7003 | Hypothetical protein. | Antibiotic biosynthesis monooxygenase. | 0.688 |
SEF18929.1 | SEF18931.1 | SAMN04488561_7000 | SAMN04488561_7002 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.948 |
SEF18929.1 | SEF18932.1 | SAMN04488561_7000 | SAMN04488561_7003 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | Antibiotic biosynthesis monooxygenase. | 0.496 |
SEF18929.1 | SEF18933.1 | SAMN04488561_7000 | SAMN04488561_7004 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | SnoaL-like domain-containing protein. | 0.467 |
SEF18929.1 | ddl-4 | SAMN04488561_7000 | SAMN04488561_7001 | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.984 |
SEF18931.1 | SEF18929.1 | SAMN04488561_7002 | SAMN04488561_7000 | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.948 |
SEF18931.1 | SEF18932.1 | SAMN04488561_7002 | SAMN04488561_7003 | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Antibiotic biosynthesis monooxygenase. | 0.496 |
SEF18931.1 | SEF18933.1 | SAMN04488561_7002 | SAMN04488561_7004 | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | SnoaL-like domain-containing protein. | 0.467 |
SEF18931.1 | ddl-4 | SAMN04488561_7002 | SAMN04488561_7001 | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.979 |
SEF18932.1 | SEE54882.1 | SAMN04488561_7003 | SAMN04488561_1698 | Antibiotic biosynthesis monooxygenase. | Hypothetical protein. | 0.688 |
SEF18932.1 | SEF18929.1 | SAMN04488561_7003 | SAMN04488561_7000 | Antibiotic biosynthesis monooxygenase. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.496 |
SEF18932.1 | SEF18931.1 | SAMN04488561_7003 | SAMN04488561_7002 | Antibiotic biosynthesis monooxygenase. | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.496 |
SEF18932.1 | SEF18933.1 | SAMN04488561_7003 | SAMN04488561_7004 | Antibiotic biosynthesis monooxygenase. | SnoaL-like domain-containing protein. | 0.723 |
SEF18932.1 | SEF18934.1 | SAMN04488561_7003 | SAMN04488561_7005 | Antibiotic biosynthesis monooxygenase. | DNA-binding transcriptional regulator, AcrR family. | 0.518 |
SEF18932.1 | ddl-4 | SAMN04488561_7003 | SAMN04488561_7001 | Antibiotic biosynthesis monooxygenase. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.496 |
SEF18933.1 | SEF18929.1 | SAMN04488561_7004 | SAMN04488561_7000 | SnoaL-like domain-containing protein. | D-alanyl-D-alanine dipeptidase; Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide. | 0.467 |
SEF18933.1 | SEF18931.1 | SAMN04488561_7004 | SAMN04488561_7002 | SnoaL-like domain-containing protein. | D-specific alpha-keto acid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.467 |
SEF18933.1 | SEF18932.1 | SAMN04488561_7004 | SAMN04488561_7003 | SnoaL-like domain-containing protein. | Antibiotic biosynthesis monooxygenase. | 0.723 |
SEF18933.1 | SEF18934.1 | SAMN04488561_7004 | SAMN04488561_7005 | SnoaL-like domain-containing protein. | DNA-binding transcriptional regulator, AcrR family. | 0.551 |
SEF18933.1 | ddl-4 | SAMN04488561_7004 | SAMN04488561_7001 | SnoaL-like domain-containing protein. | D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.467 |
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