STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB36857.1Sortase family protein; Psort location: Cytoplasmic, score: 8.87. (228 aa)    
Predicted Functional Partners:
EEB36859.1
Sortase family protein.
 
    
0.845
EEB36863.1
LPXTG-motif cell wall anchor domain protein; Psort location: Cellwall, score: 9.25.
  
  
 0.812
EEB36856.1
Sortase family protein; Psort location: Cytoplasmic, score: 8.87.
 
    
0.807
EEB36858.1
Hypothetical protein.
       0.773
EEB36866.1
Cna protein B-type domain protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.712
EEB36862.1
KEGG: pfa:MAL13P1.278 1.6e-07 Ser/Thr protein kinase K00870; Psort location: Cellwall, score: 9.99.
 
  
 0.609
EEB36855.1
Hypothetical protein.
       0.528
EEB36854.1
Hypothetical protein.
       0.500
EEB35944.1
Cna protein B-type domain protein; KEGG: ddi:DDB0167703 9.4e-18 hypothetical protein K01971; Psort location: Extracellular, score: 9.75.
  
     0.463
EEB35943.1
KEGG: ldb:Ldb1189 3.2e-07 prtB; proteinase precursor K01361; Psort location: Cellwall, score: 9.38.
 
    0.443
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.