STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB36644.1KEGG: reh:H16_B1845 1.7e-35 uracil-dna glycosylase K01249; Psort location: Cytoplasmic, score: 8.87. (190 aa)    
Predicted Functional Partners:
EEB36643.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.733
yeaZ
Universal bacterial protein YeaZ; KEGG: ctc:CTC02444 3.8e-29 O-sialoglycoprotein endopeptidase K01409; Psort location: Cytoplasmic, score: 8.87.
  
    0.716
EEB36645.1
Hypothetical protein.
 
     0.677
EEB37053.1
Hypothetical protein; KEGG: bbu:BB0259 0.0021 B. burgdorferi predicted coding region BB0259 K01238.
    
   0.557
EEB36126.1
Hypothetical protein.
    
   0.557
EEB35728.1
KEGG: shn:Shewana3_3590 6.3e-15 single-strand binding protein K00655.
    
   0.557
EEB35672.1
Hypothetical protein; KEGG: efa:EF0195 1.0e-12 gpm; phosphoglycerate mutase 1 K01834; Psort location: Cytoplasmic, score: 8.87.
   
    0.557
EEB35673.1
Phosphoglycerate mutase 1 family; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
   
    0.557
EEB35367.1
KEGG: shn:Shewana3_3590 2.0e-16 single-strand binding protein K00655.
    
   0.557
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
     
 0.555
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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