STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metNABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (342 aa)    
Predicted Functional Partners:
EEB36014.1
NLPA lipoprotein; Belongs to the nlpA lipoprotein family.
 
 0.999
EEB36015.1
NLPA lipoprotein; Belongs to the nlpA lipoprotein family.
 
 0.999
EEB36016.1
ABC transporter, permease protein; KEGG: baa:BA_0884 8.6e-39 binding-protein-dependent transport systems inner membrane component K00294; Psort location: CytoplasmicMembrane, score: 9.99.
 
 0.999
metAA
Putative homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.
  
  
 0.857
EEB35554.1
Hypothetical protein; KEGG: cje:Cj1202 2.6e-08 metF; 5,10-methylenetetrahydrofolate reductase K00297; Belongs to the methylenetetrahydrofolate reductase family.
   
 
 0.836
EEB35555.1
KEGG: cjr:CJE1336 1.9e-57 metF; 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.836
EEB35361.1
KEGG: pen:PSEEN3042 7.0e-28 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 9.82.
     
0.795
EEB35362.1
ABC transporter, permease/ATP-binding protein; KEGG: cch:Cag_0988 1.3e-19 ATPase K02003; Psort location: CytoplasmicMembrane, score: 9.82.
     
0.795
EEB36019.1
Amidohydrolase; KEGG: lic:LIC11318 2.2e-49 amaA; N-acyl-L-amino acid amidohydrolase K01436; Psort location: Cytoplasmic, score: 8.87.
       0.780
EEB35358.1
KEGG: pen:PSEEN3042 5.0e-09 macB; macrolide ABC efflux protein MacB; Psort location: CytoplasmicMembrane, score: 9.75.
 
   
  0.775
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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