STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB35872.1DNA-binding helix-turn-helix protein; KEGG: eba:ebA2762 0.00013 boxR; putative regulator of aerobic benzoate metabolic operon containing shikimate kinase-like domain K00891; Psort location: Cytoplasmic, score: 8.87. (116 aa)    
Predicted Functional Partners:
cinA
Molybdopterin binding domain protein; KEGG: mmu:319945 5.5e-08 Flad1; RFad1, flavin adenine dinucleotide synthetase, homolog (yeast) K00953; Psort location: Cytoplasmic, score: 8.87; Belongs to the CinA family.
    
 0.876
EEB35197.1
Hypothetical protein.
    
 0.876
nadE
NAD+ synthase; KEGG: ctc:CTC00679 1.9e-96 nadE; NAD(+) synthetase K01950; Psort location: Cytoplasmic, score: 8.87.
     
 0.865
nifJ
Pyruvate synthase; KEGG: tte:TTE0445 0. porA; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit K03737.
  
 
 0.829
nifJ-2
KEGG: cac:CAC2229 0. pyruvate:ferredoxin oxidoreductase K03737; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.821
EEB35871.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.773
EEB35165.1
DNA-binding helix-turn-helix protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.750
EEB36920.1
Transcriptional regulator, LuxR family; KEGG: fal:FRAAL1304 1.2e-18 putative protein-glutamate methylesterase; Psort location: Cytoplasmic, score: 9.98.
   
 0.531
EEB36139.1
HAD hydrolase, TIGR02254 family; KEGG: btk:BT9727_5088 3.8e-29 hydrolase, haloacid dehalogenase-like family; possible 2-haloacid dehalogenase K01560.
  
  
  0.466
EEB35873.1
Cation transport protein; KEGG: shn:Shewana3_0031 1.3e-60 potassium uptake protein, TrkH family K00961; Psort location: CytoplasmicMembrane, score: 10.00.
       0.465
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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