STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EEB35630.1EDD domain protein, DegV family; KEGG: mcp:MCAP_0376 0.00085 argS; arginyl-tRNA synthetase K01887; Psort location: Cytoplasmic, score: 8.87. (288 aa)    
Predicted Functional Partners:
EEB36305.1
KEGG: lwe:lwe1833 3.3e-101 DAK2 domain protein K00863; Psort location: Cytoplasmic, score: 8.87.
   0.962
EEB36868.1
Hypothetical protein; KEGG: lwe:lwe1833 4.2e-07 DAK2 domain protein K00863; Psort location: Cytoplasmic, score: 8.87.
 
   0.725
EEB36304.1
Hypothetical protein.
 
    0.632
rex
CoA binding domain protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
  
   
 0.441
ilvB
Acetolactate synthase, large subunit, biosynthetic type; KEGG: cac:CAC3169 1.7e-136 ilvB; acetolactate synthase large subunit K01652.
  
    0.436
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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