STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pheSKEGG: tte:TTE1689 2.7e-99 pheS; phenylalanyl-tRNA synthetase alpha subunit K01889; Psort location: Cytoplasmic, score: 10.00. (340 aa)    
Predicted Functional Partners:
pheT
KEGG: cac:CAC2356 3.3e-156 pheT; phenylalanyl-tRNA synthetase (beta subunit) K01890; Psort location: Cytoplasmic, score: 9.98.
 
 0.999
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
  
 0.985
lysS
lysine--tRNA ligase; KEGG: tte:TTE2372 5.6e-170 lysU; lysyl-tRNA synthetase class II K04567; Psort location: Cytoplasmic, score: 10.00; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
 0.984
EEB37008.1
Putative methionine--tRNA ligase, beta subunit; KEGG: pgi:PG0170 2.7e-20 metG; methionyl-tRNA synthetase K01874; Psort location: Cytoplasmic, score: 9.98.
  
 0.976
EEB37090.1
Hypothetical protein.
  
 0.976
EEB37091.1
tRNA binding domain protein; KEGG: vvu:VV1_3028 8.6e-12 methionyl-tRNA synthetase K01874; Psort location: Cytoplasmic, score: 8.87.
  
 0.976
EEB36123.1
Putative methionine--tRNA ligase, beta subunit; KEGG: mja:MJ1263 2.1e-21 metS; methionyl-tRNA synthetase K01874; Psort location: Cytoplasmic, score: 9.98.
  
 0.976
EEB36130.1
Putative methionine--tRNA ligase, beta subunit; KEGG: pgi:PG0170 2.7e-20 metG; methionyl-tRNA synthetase K01874; Psort location: Cytoplasmic, score: 9.98.
  
 0.976
rplP
Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.
   
 0.877
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
  
 
 0.829
Your Current Organism:
Anaerococcus hydrogenalis
NCBI taxonomy Id: 561177
Other names: A. hydrogenalis DSM 7454, Anaerococcus hydrogenalis DSM 7454, Anaerococcus hydrogenalis GIFU 7662, Anaerococcus hydrogenalis str. DSM 7454, Anaerococcus hydrogenalis strain DSM 7454
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