Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFA22250.1 | EFA23572.1 | BIFGAL_04008 | BIFGAL_02676 | Transglycosylase; KEGG: rxy:Rxyl_2308 3.9e-82 penicillin-binding protein 1A K05364; Psort location: Extracellular, score: 9.55. | Hypothetical protein. | 0.455 |
EFA22694.1 | EFA23572.1 | BIFGAL_03725 | BIFGAL_02676 | OsmC-like protein. | Hypothetical protein. | 0.425 |
EFA23570.1 | EFA23572.1 | BIFGAL_02674 | BIFGAL_02676 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein. | 0.513 |
EFA23570.1 | EFA23578.1 | BIFGAL_02674 | BIFGAL_02682 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | SUF system FeS assembly protein, NifU family; Psort location: Cytoplasmic, score: 8.87. | 0.561 |
EFA23570.1 | sufB | BIFGAL_02674 | BIFGAL_02678 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | FeS assembly protein SufB; Psort location: Cytoplasmic, score: 8.87. | 0.596 |
EFA23570.1 | sufC | BIFGAL_02674 | BIFGAL_02680 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | KEGG: ava:Ava_0425 7.3e-65 sufC; FeS assembly ATPase SufC K09013; Psort location: CytoplasmicMembrane, score: 9.49. | 0.592 |
EFA23570.1 | sufD | BIFGAL_02674 | BIFGAL_02679 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | FeS assembly protein SufD; Psort location: Cytoplasmic, score: 8.87. | 0.596 |
EFA23570.1 | sufS | BIFGAL_02674 | BIFGAL_02681 | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.564 |
EFA23572.1 | EFA22250.1 | BIFGAL_02676 | BIFGAL_04008 | Hypothetical protein. | Transglycosylase; KEGG: rxy:Rxyl_2308 3.9e-82 penicillin-binding protein 1A K05364; Psort location: Extracellular, score: 9.55. | 0.455 |
EFA23572.1 | EFA22694.1 | BIFGAL_02676 | BIFGAL_03725 | Hypothetical protein. | OsmC-like protein. | 0.425 |
EFA23572.1 | EFA23570.1 | BIFGAL_02676 | BIFGAL_02674 | Hypothetical protein. | Putative CTP synthase; KEGG: blo:BL0874 2.2e-182 pyrG; CTP synthase K01937; Psort location: Cytoplasmic, score: 8.87. | 0.513 |
EFA23572.1 | EFA23573.1 | BIFGAL_02676 | BIFGAL_02677 | Hypothetical protein. | Hypothetical protein. | 0.605 |
EFA23572.1 | EFA23578.1 | BIFGAL_02676 | BIFGAL_02682 | Hypothetical protein. | SUF system FeS assembly protein, NifU family; Psort location: Cytoplasmic, score: 8.87. | 0.520 |
EFA23572.1 | sufB | BIFGAL_02676 | BIFGAL_02678 | Hypothetical protein. | FeS assembly protein SufB; Psort location: Cytoplasmic, score: 8.87. | 0.659 |
EFA23572.1 | sufC | BIFGAL_02676 | BIFGAL_02680 | Hypothetical protein. | KEGG: ava:Ava_0425 7.3e-65 sufC; FeS assembly ATPase SufC K09013; Psort location: CytoplasmicMembrane, score: 9.49. | 0.660 |
EFA23572.1 | sufD | BIFGAL_02676 | BIFGAL_02679 | Hypothetical protein. | FeS assembly protein SufD; Psort location: Cytoplasmic, score: 8.87. | 0.659 |
EFA23572.1 | sufS | BIFGAL_02676 | BIFGAL_02681 | Hypothetical protein. | Cysteine desulfurase, SufS subfamily; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.554 |
EFA23573.1 | EFA23572.1 | BIFGAL_02677 | BIFGAL_02676 | Hypothetical protein. | Hypothetical protein. | 0.605 |
EFA23573.1 | EFA23578.1 | BIFGAL_02677 | BIFGAL_02682 | Hypothetical protein. | SUF system FeS assembly protein, NifU family; Psort location: Cytoplasmic, score: 8.87. | 0.571 |
EFA23573.1 | sufB | BIFGAL_02677 | BIFGAL_02678 | Hypothetical protein. | FeS assembly protein SufB; Psort location: Cytoplasmic, score: 8.87. | 0.773 |
page 1 of 3