STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23616.1Phosphoglycerate mutase family protein; KEGG: gbe:GbCGDNIH1_0899 1.9e-11 phosphohistidine phosphatase SixA K01112. (183 aa)    
Predicted Functional Partners:
EFA23615.1
Methyltransferase domain protein; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.851
EFA23614.1
KEGG: blo:BL0825 1.1e-77 probable ATP binding protein of ABC transporter K02013; Psort location: CytoplasmicMembrane, score: 9.49.
       0.706
nnrD
Putative YjeF domain protein; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.
 
 
   0.658
metE
5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
       0.653
metF
KEGG: blo:BL0797 6.6e-96 metF; 5,10-methylenetetrahydrofolate reductase K00297; Psort location: Cytoplasmic, score: 8.87.
       0.582
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
   0.499
hisS
histidine--tRNA ligase; KEGG: blo:BL0017 1.8e-189 hisS; histidyl-tRNA synthetase K01892; Psort location: Cytoplasmic, score: 9.98.
 
     0.456
EFA23249.1
Polyphosphate:nucleotide phosphotransferase, PPK2 family; KEGG: gbe:GbCGDNIH1_1622 4.8e-29 polyphosphate kinase K00937; Psort location: Cytoplasmic, score: 8.87.
 
 
   0.447
EFA23466.1
YodA.
    
   0.436
EFA23503.1
Septum formation initiator.
  
     0.411
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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