STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23767.1Penicillin-binding protein, transpeptidase domain protein; KEGG: blo:BL1317 3.9e-201 ftsI; peptidoglycan synthetase; penicillin-binding protein 3 precursor K03587; Psort location: CytoplasmicMembrane, score: 9.82. (608 aa)    
Predicted Functional Partners:
EFA23773.1
Putative cell division protein FtsW; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.982
EFA23776.1
POTRA domain protein, FtsQ-type.
 
 
 0.956
EFA22349.1
Cell cycle protein, FtsW/RodA/SpoVE family; KEGG: bqu:BQ08890 0.0068 mraY; phospho-n-acetylmuramoyl-pentapeptide- transferase K01000; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the SEDS family.
 
 
 0.940
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
 
  
 0.939
pbpA
Penicillin-binding protein A; KEGG: ace:Acel_0020 1.9e-98 peptidoglycan glycosyltransferase K05364; Psort location: CytoplasmicMembrane, score: 9.82.
  
  
0.928
EFA22250.1
Transglycosylase; KEGG: rxy:Rxyl_2308 3.9e-82 penicillin-binding protein 1A K05364; Psort location: Extracellular, score: 9.55.
 
 
 0.918
murF
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.
 
  
 0.909
EFA23891.1
Transglycosylase; KEGG: fra:Francci3_0754 1.1e-72 twin-arginine translocation pathway signal K05366; Psort location: Extracellular, score: 9.55.
 
 
 0.907
mraZ
Protein MraZ; Psort location: Cytoplasmic, score: 8.87; Belongs to the MraZ family.
 
  
 0.891
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
 
  
 0.886
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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