STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23790.1Aldose 1-epimerase; KEGG: fal:FRAAL2426 3.0e-36 putative aldose-1-epimerase K01785; Psort location: Cytoplasmic, score: 8.87. (296 aa)    
Predicted Functional Partners:
galK
Galactokinase; KEGG: blo:BL1210 4.9e-139 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family. GalK subfamily.
 
 0.989
EFA22742.1
Phosphotransferase system, EIIC; KEGG: blo:BL1632 1.3e-195 ptsG; pts system, glucose-specific IIABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.967
EFA23362.1
KEGG: msu:MS0749 7.0e-179 lacZ; beta-galactosidase/beta-glucuronidase K01190; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.908
EFA22908.1
Alpha-galactosidase; KEGG: pac:PPA2057 6.7e-87 alpha-galactosidase K07407; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.895
EFA23223.1
ROK family protein; KEGG: blo:BL0047 1.1e-109 ppgK; polyphosphate glucokinase K00886.
    
 0.889
galT
KEGG: blo:BL1211 1.2e-181 galT1; galactose-1-phosphate uridylyltransferase K00964; Psort location: Cytoplasmic, score: 8.87.
 
 0.796
EFA22525.1
ROK family protein; KEGG: eci:UTI89_C0670 1.2e-34 nagC; transcriptional repressor of nag (N-acetylglucosamine) operon K02565; Psort location: Cytoplasmic, score: 9.98.
 
  
 0.750
EFA22045.1
Hypothetical protein; KEGG: tte:TTE0090 0.0048 nagC; transcriptional regulator K00845.
    
 0.709
ispH
4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.
       0.662
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.
 
 
 0.631
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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