STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23831.1ATPase family associated with various cellular activities (AAA); KEGG: eco:b4346 7.8e-77 mcrB, rglB; component of 5-methylcytosine-specific restriction enzyme McrBC K07452; Psort location: Cytoplasmic, score: 8.87. (837 aa)    
Predicted Functional Partners:
EFA23832.1
Putative 5-methylcytosine-specific restriction enzyme subunit McrC; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.999
EFA23833.1
Hypothetical protein; Psort location: Extracellular, score: 8.82.
       0.458
EFA23830.1
Acetyltransferase, GNAT family; KEGG: mma:MM2658 4.5e-10 acetyltransferase K00676; Psort location: Cytoplasmic, score: 8.87.
       0.450
EFA23633.1
ADP-ribosylglycohydrolase; KEGG: spr:spr0946 1.8e-93 ADP-ribosylglycohydrolase K05521; Psort location: Cytoplasmic, score: 8.87.
 
     0.416
leuS
leucine--tRNA ligase; KEGG: blo:BL1450 0. leuS; leucyl-tRNA synthetase K01869; Psort location: Cytoplasmic, score: 9.65; Belongs to the class-I aminoacyl-tRNA synthetase family.
    
   0.412
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.