STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galKGalactokinase; KEGG: blo:BL1210 4.9e-139 galK; galactokinase K00849; Psort location: Cytoplasmic, score: 8.87; Belongs to the GHMP kinase family. GalK subfamily. (453 aa)    
Predicted Functional Partners:
galT
KEGG: blo:BL1211 1.2e-181 galT1; galactose-1-phosphate uridylyltransferase K00964; Psort location: Cytoplasmic, score: 8.87.
 0.999
galE
KEGG: blo:BL1671 2.1e-161 galE2; UDP-glucose 4-epimerase K01784; Psort location: Cytoplasmic, score: 8.87.
 
 0.990
EFA23790.1
Aldose 1-epimerase; KEGG: fal:FRAAL2426 3.0e-36 putative aldose-1-epimerase K01785; Psort location: Cytoplasmic, score: 8.87.
 
 0.989
EFA22993.1
Oxidoreductase, NAD-binding domain protein; KEGG: lpl:lp_1136 1.6e-37 oxidoreductase (putative).
 
 0.837
EFA22742.1
Phosphotransferase system, EIIC; KEGG: blo:BL1632 1.3e-195 ptsG; pts system, glucose-specific IIABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
   
  
 0.720
EFA23884.1
Transcriptional regulator, DeoR family; KEGG: net:Neut_1829 0.00066 ribose 5-phosphate isomerase K01806; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.699
xylB
Xylulokinase; KEGG: blo:BL1709 1.2e-208 xylB; xylulose kinase K00854.
 
  
 0.695
rpsL
Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.
      
 0.676
EFA23362.1
KEGG: msu:MS0749 7.0e-179 lacZ; beta-galactosidase/beta-glucuronidase K01190; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.648
EFA22908.1
Alpha-galactosidase; KEGG: pac:PPA2057 6.7e-87 alpha-galactosidase K07407; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.537
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.