node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFA22151.1 | rbpA | BIFGAL_04348 | BIFGAL_02764 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.999 |
EFA22151.1 | rpoA | BIFGAL_04348 | BIFGAL_03795 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA22151.1 | rpoB | BIFGAL_04348 | BIFGAL_03061 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA22151.1 | rpoC | BIFGAL_04348 | BIFGAL_03062 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA22151.1 | rpoD | BIFGAL_04348 | BIFGAL_02502 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.999 |
EFA22151.1 | rpoZ | BIFGAL_04348 | BIFGAL_03422 | CarD-like protein; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
EFA23762.1 | rpoA | BIFGAL_02870 | BIFGAL_03795 | Hypothetical protein; KEGG: btk:BT9727_2572 5.8e-28 uvrD; UvrD/Rep helicase family protein K01529; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.805 |
EFA23762.1 | rpoB | BIFGAL_02870 | BIFGAL_03061 | Hypothetical protein; KEGG: btk:BT9727_2572 5.8e-28 uvrD; UvrD/Rep helicase family protein K01529; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA23762.1 | rpoC | BIFGAL_02870 | BIFGAL_03062 | Hypothetical protein; KEGG: btk:BT9727_2572 5.8e-28 uvrD; UvrD/Rep helicase family protein K01529; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA23762.1 | rpoZ | BIFGAL_02870 | BIFGAL_03422 | Hypothetical protein; KEGG: btk:BT9727_2572 5.8e-28 uvrD; UvrD/Rep helicase family protein K01529; Psort location: Cytoplasmic, score: 8.87. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.844 |
EFA23787.1 | rpoA | BIFGAL_02896 | BIFGAL_03795 | Sigma-70 region 2; KEGG: reh:H16_A2563 1.2e-14 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.781 |
EFA23787.1 | rpoB | BIFGAL_02896 | BIFGAL_03061 | Sigma-70 region 2; KEGG: reh:H16_A2563 1.2e-14 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA23787.1 | rpoC | BIFGAL_02896 | BIFGAL_03062 | Sigma-70 region 2; KEGG: reh:H16_A2563 1.2e-14 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
EFA23787.1 | rpoD | BIFGAL_02896 | BIFGAL_02502 | Sigma-70 region 2; KEGG: reh:H16_A2563 1.2e-14 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily. | RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. | 0.676 |
EFA23787.1 | rpoZ | BIFGAL_02896 | BIFGAL_03422 | Sigma-70 region 2; KEGG: reh:H16_A2563 1.2e-14 rpoE1; DNA-directed RNA polymerase sigma subunit (RpoE,sigma24) K00960; Psort location: Cytoplasmic, score: 8.87; Belongs to the sigma-70 factor family. ECF subfamily. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.778 |
greA | rpoA | BIFGAL_02613 | BIFGAL_03795 | Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.960 |
greA | rpoB | BIFGAL_02613 | BIFGAL_03061 | Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.988 |
greA | rpoC | BIFGAL_02613 | BIFGAL_03062 | Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
greA | rpoZ | BIFGAL_02613 | BIFGAL_03422 | Prokaryotic transcription elongation factor, GreA/GreB domain protein; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. | DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.941 |
nusA | rpoA | BIFGAL_03786 | BIFGAL_03795 | Transcription termination factor NusA; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |