STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22963.1Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99. (857 aa)    
Predicted Functional Partners:
EFA22964.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
 
    0.970
EFA22966.1
Fibronectin type III domain protein; KEGG: chu:CHU_1906 8.2e-11 CHU large protein, possible SAP or adhesin AidA-related K01238.
 
     0.902
EFA22962.1
KEGG: bba:Bd0397 9.3e-25 protein phosphatase K01090; Psort location: Cytoplasmic, score: 8.87.
       0.851
EFA22960.1
FHA domain protein; KEGG: eba:ebA1682 0.0029 putative metal-dependent phosphohydrolase,possibly cGMP-dependent 3',5'-cyclic phosphodiesterase K01120; Psort location: Cytoplasmic, score: 8.87.
 
     0.776
EFA22965.1
ATPase family associated with various cellular activities (AAA); KEGG: tko:TK1846 1.3e-83 MoxR-related ATPase, AAA superfamily K03924; Psort location: Cytoplasmic, score: 9.65.
 
   
 0.734
EFA22666.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.731
EFA22961.1
Hypothetical protein; KEGG: bxe:Bxe_A1062 0.00020 ribonuclease E and G; Psort location: Cytoplasmic, score: 8.87.
       0.695
EFA23704.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.675
EFA23131.1
Hypothetical protein; KEGG: yps:YPTB0915 9.1e-05 sbcC; putative ATP-dependent dsDNA exonuclease K03546; Psort location: Cytoplasmic, score: 8.87.
  
     0.674
EFA22675.1
Hypothetical protein.
 
     0.657
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.