STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdsAKEGG: blo:BL1507 4.6e-111 cdsA; probable phosphatidate cytidylyltransferase K00981; Psort location: CytoplasmicMembrane, score: 10.00. (320 aa)    
Predicted Functional Partners:
EFA23878.1
Acyltransferase; KEGG: blo:BL1424 2.4e-91 1-acyl-sn-glycerol-3-phosphate acyltransferase K00655; Psort location: Cytoplasmic, score: 8.87.
    
 0.974
pgsA
KEGG: blo:BL1412 1.8e-68 pgsA3; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.969
uppS
Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
  
  
 0.938
EFA23095.1
Putative CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: blo:BL0750 1.3e-58 pgsA; possible CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyl-transferase K00995; Psort location: CytoplasmicMembrane, score: 9.99; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.934
EFA23078.1
CDP-alcohol phosphatidyltransferase; KEGG: pac:PPA1078 4.2e-30 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase K00995; Psort location: CytoplasmicMembrane, score: 7.63.
    
 0.921
EFA23383.1
Acyltransferase; KEGG: bcl:ABC1873 8.9e-12 plsC; 1-acylglycerol-3-phosphate O-acyltransferase K00655; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.908
EFA22741.1
Diacylglycerol kinase catalytic domain protein; KEGG: syn:sll0036 4.1e-16 putative methylglyoxal synthase K01734; Psort location: Cytoplasmic, score: 8.87.
    
 0.890
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.756
frr
Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.
 
  
 0.750
EFA22258.1
Diacylglycerol kinase catalytic domain protein; KEGG: ava:Ava_4772 5.5e-12 methylglyoxal synthase K01734; Psort location: Cytoplasmic, score: 8.87.
    
 0.713
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.