STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23167.1HAD hydrolase, family IA, variant 3; KEGG: cch:Cag_0071 2.0e-16 beta-phosphoglucomutase hydrolase K01838; Psort location: Cytoplasmic, score: 8.87. (223 aa)    
Predicted Functional Partners:
thiD
Phosphomethylpyrimidine kinase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
      0.845
EFA22894.1
HAD hydrolase, family IA, variant 3; KEGG: msm:MSMEG_4183 1.4e-20 phosphoglycolate phosphatase, chromosomal K01091; Psort location: Cytoplasmic, score: 8.87.
  
     0.761
recN
DNA repair protein RecN; May be involved in recombinational repair of damaged DNA.
       0.723
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
       0.649
guaA
GMP synthase (glutamine-hydrolyzing) domain protein; Catalyzes the synthesis of GMP from XMP.
  
 
  0.596
EFA23170.1
Cation transport protein; KEGG: sma:SAV919 0.0049 kdpA; putative cation transport system component K01546; Psort location: CytoplasmicMembrane, score: 10.00.
       0.583
EFA23171.1
TrkA N-terminal domain protein; KEGG: lsa:LSA0297 0.0087 gntZ; 6-phosphogluconate dehydrogenase K00033; Psort location: Cytoplasmic, score: 8.87.
       0.583
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.523
EFA22742.1
Phosphotransferase system, EIIC; KEGG: blo:BL1632 1.3e-195 ptsG; pts system, glucose-specific IIABC component K02755:K02756:K02757; Psort location: CytoplasmicMembrane, score: 10.00.
  
  
 0.523
EFA22528.1
Glycosyltransferase, group 1 family protein; KEGG: hpa:HPAG1_0973 5.3e-55 type 1 capsular polysaccharide biosynthesis protein J K00754; Psort location: Cytoplasmic, score: 8.87.
  
 
  0.497
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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