STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23208.1ABC transporter, ATP-binding protein; KEGG: cch:Cag_0453 3.9e-75 ATPase K06147; Psort location: CytoplasmicMembrane, score: 10.00. (610 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.837
EFA23490.1
Hypothetical protein; KEGG: fal:FRAAL1741 3.5e-10 putative ABC transporter ATP-binding protein; Psort location: CytoplasmicMembrane, score: 9.26.
     0.800
EFA23209.1
ABC transporter, ATP-binding protein; KEGG: pen:PSEEN4987 1.1e-54 msbA; lipid A export ATP-binding/permease protein MsbA; Psort location: CytoplasmicMembrane, score: 10.00.
 
    
0.746
EFA22584.1
KEGG: blo:BL1176 2.6e-108 ATP binding protein of ABC transporter K02028; Psort location: CytoplasmicMembrane, score: 9.49.
 
     
0.725
EFA23210.1
Transcriptional regulator, MarR family; Psort location: Cytoplasmic, score: 8.87.
 
     0.694
EFA23725.1
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Methionine importer (TC 3.A.1.24) family.
 
     
0.653
EFA22450.1
ABC transporter, ATP-binding protein; KEGG: dra:DR2153 9.2e-90 putative polar amino acid transport system ATP-binding protein K02028; Psort location: CytoplasmicMembrane, score: 9.49; Belongs to the ABC transporter superfamily.
 
     
0.645
msrB
methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.591
ybeY
Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
    
   0.558
hrpA
KEGG: blo:BL1305 0. hrpA; ATP-dependent helicase K03578; Psort location: Cytoplasmic, score: 8.87.
    
  0.505
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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