STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA23301.1SNARE-like domain protein; KEGG: oih:OB2407 1.6e-39 alkaline phosphatase K01077; Psort location: CytoplasmicMembrane, score: 9.99. (295 aa)    
Predicted Functional Partners:
arc
Proteasome ATPase; KEGG: nca:Noca_2639 3.2e-103 vesicle-fusing ATPase; Psort location: CytoplasmicMembrane, score: 9.49.
       0.851
EFA23299.1
Proteasome accessory factor PafA2; Psort location: Cytoplasmic, score: 8.87.
       0.845
serB
KEGG: blo:BL1792 1.2e-64 serB; probable phosphoserine phosphatase K01079; Psort location: Cytoplasmic, score: 8.87.
  
    0.726
EFA23298.1
KEGG: fal:FRAAL2074 5.5e-21 suhB; inositol-1-monophosphatase (IMPase) (inositol-1-phosphatase) (I-1-Pase) K01092; Psort location: Cytoplasmic, score: 8.87.
       0.658
EFA23296.1
Putative proteasome accessory factor PafA; Psort location: Cytoplasmic, score: 8.87.
       0.605
EFA23297.1
Ubiquitin-like protein Pup; Protein modifier that is covalently attached to lysine residues of substrate proteins, thereby targeting them for proteasomal degradation. The tagging system is termed pupylation. Belongs to the prokaryotic ubiquitin-like protein family.
       0.605
EFA22660.1
Hypothetical protein; KEGG: blo:BL1685 4.3e-37 sulD; probable bifunctional folate synthesis protein [includes: dihydroneopterin aldolase (DhnA); 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950:K01633; Psort location: Cytoplasmic, score: 8.87.
    
  0.515
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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