STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22535.1Alcohol acetyltransferase; Psort location: Cytoplasmic, score: 8.87. (483 aa)    
Predicted Functional Partners:
EFA22534.1
Hydrolase, alpha/beta domain protein; KEGG: bur:Bcep18194_B1213 1.1e-31 lipolytic enzyme K01046; Psort location: Cytoplasmic, score: 9.98.
 
 
  0.965
EFA22536.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
       0.826
EFA22537.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
       0.474
EFA22297.1
LPXTG-motif cell wall anchor domain protein; KEGG: cal:orf19.4072 0.00087 HYR10; similar to cell surface flocculin K01186.
    
 0.464
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
  0.442
EFA22671.1
KEGG: cpf:CPF_2328 1.9e-59 glycosyl transferase, group 2 family protein K00754; Psort location: CytoplasmicMembrane, score: 9.99.
  
  
  0.432
EFA22895.1
Hypothetical protein; KEGG: cgb:cg2958 1.4e-31 butA; L-2,3-butanediol dehydrogenase/acetoin reductasetase K03366; Psort location: Cytoplasmic, score: 9.98.
    
 0.431
EFA22221.1
Hypothetical protein; KEGG: sde:Sde_2655 2.1e-07 agarase K01219; Psort location: Cellwall, score: 9.17.
    
  0.413
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.