STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22550.1KEGG: cgl:NCgl1309 4.6e-111 cgl1364; inosine-uridine nucleoside N-ribohydrolase K01239; Psort location: Cytoplasmic, score: 8.87. (353 aa)    
Predicted Functional Partners:
EFA23709.1
KEGG: cgb:cg2168 1.4e-36 iunH2; putative nucleoside hydrolase protein K01249.
  
  
 
0.919
apt
Putative adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
     
 0.917
EFA22473.1
KEGG: lsl:LSL_0819 1.4e-107 uRH; inosine-uridine preferring nucleoside hydrolase K01239; Psort location: Cytoplasmic, score: 8.87.
 
  
 
0.910
hpt
KEGG: blo:BL1681 9.1e-67 hprT; hypoxanthine-guanine phosphoribosyltransferase K00760; Psort location: Cytoplasmic, score: 9.98; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
     
 0.898
EFA23850.1
Isochorismatase family protein; KEGG: blo:BL0897 3.8e-68 pncA; probable pyrazinamidase/nicotinamidase K01440:K08281; Psort location: Cytoplasmic, score: 8.87.
     
 0.887
EFA22551.1
Hypothetical protein.
       0.661
rbsK
Putative ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 
 0.657
EFA22467.1
KEGG: tfu:Tfu_1336 3.2e-48 putative Sir2 family regulator K01463; Psort location: Cytoplasmic, score: 8.87.
   
 
  0.511
EFA22080.1
Putative haloacid dehalogenase, type II; KEGG: tko:TK0058 3.0e-13 hydrolase, HAD superfamily K01560; Psort location: Cytoplasmic, score: 8.87.
   
 
  0.509
EFA22627.1
KEGG: lsa:LSA0801 6.6e-151 pdp; pyrimidine-nucleoside phosphorylase K00756; Psort location: Cytoplasmic, score: 8.87.
   
 
 0.459
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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