Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EFA22802.1 | EFA22804.1 | BIFGAL_03836 | BIFGAL_03838 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EFA22802.1 | EFA22805.1 | BIFGAL_03836 | BIFGAL_03839 | Hypothetical protein. | Hypothetical protein. | 0.601 |
EFA22802.1 | pdxB | BIFGAL_03836 | BIFGAL_03837 | Hypothetical protein. | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.572 |
EFA22804.1 | EFA22802.1 | BIFGAL_03838 | BIFGAL_03836 | Hypothetical protein. | Hypothetical protein. | 0.773 |
EFA22804.1 | EFA22805.1 | BIFGAL_03838 | BIFGAL_03839 | Hypothetical protein. | Hypothetical protein. | 0.601 |
EFA22804.1 | pdxB | BIFGAL_03838 | BIFGAL_03837 | Hypothetical protein. | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.572 |
EFA22805.1 | EFA22802.1 | BIFGAL_03839 | BIFGAL_03836 | Hypothetical protein. | Hypothetical protein. | 0.601 |
EFA22805.1 | EFA22804.1 | BIFGAL_03839 | BIFGAL_03838 | Hypothetical protein. | Hypothetical protein. | 0.601 |
EFA22805.1 | pdxB | BIFGAL_03839 | BIFGAL_03837 | Hypothetical protein. | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.454 |
pdxB | EFA22802.1 | BIFGAL_03837 | BIFGAL_03836 | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.572 |
pdxB | EFA22804.1 | BIFGAL_03837 | BIFGAL_03838 | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.572 |
pdxB | EFA22805.1 | BIFGAL_03837 | BIFGAL_03839 | KEGG: bja:bll2918 5.5e-44 glycerate dehydrogenase K00018; Psort location: Cytoplasmic, score: 9.98; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.454 |