STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22313.1Receptor family ligand-binding protein; KEGG: ava:Ava_2791 3.3e-05 serine/threonine protein kinase K00903. (455 aa)    
Predicted Functional Partners:
EFA22316.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: reh:H16_A3653 1.0e-13 ABC-type transporter, ATPase and permease components; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.979
EFA22317.1
Branched-chain amino acid ABC transporter, permease protein; KEGG: rha:RHA1_ro10323 7.8e-20 ABC branched chain amino acid transporter ATP-binding subunit; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.976
EFA22315.1
ABC transporter, ATP-binding protein; KEGG: bur:Bcep18194_A5827 4.2e-46 ABC branched-chain amino acid family transporter, ATPase subunit K01995; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.972
EFA22314.1
ABC transporter, ATP-binding protein; KEGG: cch:Cag_0849 2.8e-49 ATPase K01996; Psort location: CytoplasmicMembrane, score: 9.49.
 
 
 0.961
EFA23514.1
Response regulator receiver domain protein; KEGG: mth:MTH440 2.3e-19 sensory transduction regulatory protein; Psort location: Cytoplasmic, score: 9.98.
  
   0.772
EFA23607.1
Class II glutamine amidotransferase; KEGG: blo:BL0834 0. gltB; glutamate synthase [NADPH] large subunit; NADPH-gogat K00265; Psort location: Cytoplasmic, score: 8.87.
     
 0.406
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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