STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22359.1Hypothetical protein; Psort location: Cytoplasmic, score: 8.87. (449 aa)    
Predicted Functional Partners:
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
       0.590
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
  
    0.531
EFA23262.1
Hypothetical protein; KEGG: cal:orf19.6763 2.4e-06 SLK19; protein involved in control of spindle dynamics together with kar3p K00870; Psort location: Cytoplasmic, score: 8.87.
 
     0.511
EFA23655.1
KEGG: lwe:lwe2649 5.4e-11 Cof-like hydrolase K01564; Psort location: Cytoplasmic, score: 8.87.
 
     0.492
EFA22425.1
Conserved hypothetical protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.
  
    0.492
EFA22522.1
Transporter, major facilitator family protein; KEGG: gme:Gmet_0086 0.0090 2-acyl-glycerophospho-ethanolamine acyltransferase K05939:K01909; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.479
coaD
KEGG: blo:BL0291 2.0e-48 coaD; phosphopantetheine adenylyltransferase K00954; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.453
EFA22914.1
HDIG domain protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.420
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.