STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFA22493.1KEGG: cal:orf19.4334 0.0021 hypothetical protein K00960. (294 aa)    
Predicted Functional Partners:
EFA22494.1
tRNA ligase class I (E and Q), catalytic domain protein; KEGG: ade:Adeh_0295 2.5e-41 glutamate--tRNA ligase K01885; Psort location: Cytoplasmic, score: 9.98; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.676
EFA22290.1
Transcriptional regulator, TetR family; KEGG: bcl:ABC2937 0.0048 NADH dehydrogenase K03885; Psort location: Cytoplasmic, score: 8.87.
  
     0.634
EFA22492.1
MIP family channel protein; KEGG: fal:FRAAL3366 8.7e-05 putative arsenate reductase (partial match); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
       0.623
EFA22495.1
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.609
EFA22286.1
Putative protein-P-II uridylyltransferase; KEGG: blo:BL0433 2.9e-212 glnD; protein-pII; uridylyltransferase K00990; Psort location: Cytoplasmic, score: 8.87.
  
     0.585
EFA22999.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.26.
 
     0.517
EFA23353.1
Cation diffusion facilitator family transporter; Psort location: CytoplasmicMembrane, score: 9.97.
  
     0.496
EFA23268.1
Hypothetical protein; KEGG: rno:309804 4.6e-13 Cdc2l6_predicted; cell division cycle 2-like 6 (CDK8-like) (predicted) K02208; Psort location: Cytoplasmic, score: 8.87.
  
     0.474
EFA23299.1
Proteasome accessory factor PafA2; Psort location: Cytoplasmic, score: 8.87.
  
     0.471
EFA23704.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.464
Your Current Organism:
Bifidobacterium gallicum
NCBI taxonomy Id: 561180
Other names: B. gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum DSM 20093, Bifidobacterium gallicum DSM 20093 = LMG 11596, Bifidobacterium gallicum JCM 8224, Bifidobacterium gallicum LMG 11596, Bifidobacterium gallicum LMG 11596 = DSM 20093
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