Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NirK | NnrR | SAMN05216376_10473 | SAMN05216376_10476 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.830 |
NirK | NnrS | SAMN05216376_10473 | SAMN05216376_10474 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Uncharacterized protein involved in response to NO. | 0.798 |
NirK | NorB | SAMN05216376_10473 | SAMN05216376_10482 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Nitric oxide reductase subunit B. | 0.973 |
NirK | NorC | SAMN05216376_10473 | SAMN05216376_10483 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Nitric oxide reductase subunit C. | 0.967 |
NirK | SDC77257.1 | SAMN05216376_10473 | SAMN05216376_10472 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.908 |
NirK | SDC77369.1 | SAMN05216376_10473 | SAMN05216376_10475 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Pseudoazurin. | 0.896 |
NirK | SDC77566.1 | SAMN05216376_10473 | SAMN05216376_10480 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Nitric oxide reductase NorD protein. | 0.653 |
NirK | SDD01667.1 | SAMN05216376_10473 | SAMN05216376_105310 | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | Pseudoazurin. | 0.807 |
NnrR | NirK | SAMN05216376_10476 | SAMN05216376_10473 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | 0.830 |
NnrR | NnrS | SAMN05216376_10476 | SAMN05216376_10474 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Uncharacterized protein involved in response to NO. | 0.847 |
NnrR | NorB | SAMN05216376_10476 | SAMN05216376_10482 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nitric oxide reductase subunit B. | 0.675 |
NnrR | NorC | SAMN05216376_10476 | SAMN05216376_10483 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nitric oxide reductase subunit C. | 0.621 |
NnrR | SDC77257.1 | SAMN05216376_10476 | SAMN05216376_10472 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.763 |
NnrR | SDC77369.1 | SAMN05216376_10476 | SAMN05216376_10475 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Pseudoazurin. | 0.890 |
NnrR | SDC77451.1 | SAMN05216376_10476 | SAMN05216376_10477 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Uncharacterized membrane protein. | 0.428 |
NnrR | SDC77566.1 | SAMN05216376_10476 | SAMN05216376_10480 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Nitric oxide reductase NorD protein. | 0.612 |
NnrR | SDD01667.1 | SAMN05216376_10476 | SAMN05216376_105310 | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | Pseudoazurin. | 0.682 |
NnrS | NirK | SAMN05216376_10474 | SAMN05216376_10473 | Uncharacterized protein involved in response to NO. | Nitrite reductase (NO-forming); Belongs to the multicopper oxidase family. | 0.798 |
NnrS | NnrR | SAMN05216376_10474 | SAMN05216376_10476 | Uncharacterized protein involved in response to NO. | cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. | 0.847 |
NnrS | NorB | SAMN05216376_10474 | SAMN05216376_10482 | Uncharacterized protein involved in response to NO. | Nitric oxide reductase subunit B. | 0.803 |
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