Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDD17735.1 | SDD68847.1 | SAMN05216376_106283 | SAMN05216376_110203 | Acyl transferase domain-containing protein. | Predicted arabinose efflux permease, MFS family. | 0.415 |
SDD68847.1 | SDD17735.1 | SAMN05216376_110203 | SAMN05216376_106283 | Predicted arabinose efflux permease, MFS family. | Acyl transferase domain-containing protein. | 0.415 |
SDD68847.1 | SDD68879.1 | SAMN05216376_110203 | SAMN05216376_110204 | Predicted arabinose efflux permease, MFS family. | Protein ImuA. | 0.558 |
SDD68847.1 | SDE09221.1 | SAMN05216376_110203 | SAMN05216376_11778 | Predicted arabinose efflux permease, MFS family. | PEP-CTERM protein-sorting domain-containing protein. | 0.527 |
SDD68847.1 | SDE12842.1 | SAMN05216376_110203 | SAMN05216376_11851 | Predicted arabinose efflux permease, MFS family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.430 |
SDD68879.1 | SDD68847.1 | SAMN05216376_110204 | SAMN05216376_110203 | Protein ImuA. | Predicted arabinose efflux permease, MFS family. | 0.558 |
SDE09221.1 | SDD68847.1 | SAMN05216376_11778 | SAMN05216376_110203 | PEP-CTERM protein-sorting domain-containing protein. | Predicted arabinose efflux permease, MFS family. | 0.527 |
SDE12842.1 | SDD68847.1 | SAMN05216376_11851 | SAMN05216376_110203 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted arabinose efflux permease, MFS family. | 0.430 |