node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
rplJ | rplT | Dd1591_3887 | Dd1591_1954 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.986 |
rplJ | rplW | Dd1591_3887 | Dd1591_0325 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.997 |
rplJ | rpmC | Dd1591_3887 | Dd1591_0331 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: ypb:YPTS_3882 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.995 |
rplJ | rpmF | Dd1591_3887 | Dd1591_1619 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: eca:ECA1793 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.982 |
rplJ | rpmI | Dd1591_3887 | Dd1591_1953 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: eta:ETA_18390 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.986 |
rplJ | rpsD | Dd1591_3887 | Dd1591_0347 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.987 |
rplJ | rpsF | Dd1591_3887 | Dd1591_0774 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.988 |
rplJ | rpsN | Dd1591_3887 | Dd1591_0336 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.987 |
rplJ | rpsP | Dd1591_3887 | Dd1591_0991 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: sgl:SG0546 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.983 |
rplJ | rpsR | Dd1591_3887 | Dd1591_0776 | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.986 |
rplT | rplJ | Dd1591_1954 | Dd1591_3887 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.986 |
rplT | rplW | Dd1591_1954 | Dd1591_0325 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.984 |
rplT | rpmC | Dd1591_1954 | Dd1591_0331 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: ypb:YPTS_3882 ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.976 |
rplT | rpmF | Dd1591_1954 | Dd1591_1619 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: eca:ECA1793 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family. | 0.985 |
rplT | rpmI | Dd1591_1954 | Dd1591_1953 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: eta:ETA_18390 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family. | 0.995 |
rplT | rpsD | Dd1591_1954 | Dd1591_0347 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.993 |
rplT | rpsF | Dd1591_1954 | Dd1591_0774 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.982 |
rplT | rpsN | Dd1591_1954 | Dd1591_0336 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family. | 0.984 |
rplT | rpsP | Dd1591_1954 | Dd1591_0991 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: sgl:SG0546 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family. | 0.989 |
rplT | rpsR | Dd1591_1954 | Dd1591_0776 | Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family. | 0.990 |