STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACT06867.1KEGG: eca:ECA2112 type III effector protein. (338 aa)    
Predicted Functional Partners:
ACT06866.1
PFAM: Pectate lyase; KEGG: eca:ECA2112 type III effector protein.
      
0.490
ACT06865.1
KEGG: eca:ECA2111 potential HrpW-specific chaperone.
       0.478
ACT06868.1
KEGG: eca:ECA2113 putative avirulence protein.
       0.465
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.