Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ACT08025.1KEGG: eca:ECA0979 hypothetical protein. (237 aa)    
Predicted Functional Partners:
ACT08103.1
PFAM: protein of unknown function DUF1131; KEGG: eca:ECA0881 hypothetical protein.
  
    0.797
ACT08903.1
PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein.
  
   
 0.790
ACT08875.1
PFAM: peptidase M16 domain protein; KEGG: eca:ECA4361 putative peptidase.
  
  
 0.783
secM
Secretion monitor family proten; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.
  
     0.774
ACT06823.1
KEGG: eca:ECA2397 hypothetical protein.
  
     0.774
ACT07121.1
PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein.
  
     0.774
ACT08865.1
PFAM: protein of unknown function DUF1145; KEGG: eca:ECA4348 hypothetical protein.
  
     0.774
ACT08869.1
KEGG: eca:ECA4355 hypothetical protein.
  
    0.774
ACT05890.1
KEGG: eca:ECA3332 hypothetical protein.
  
     0.773
ACT07800.1
KEGG: ypi:YpsIP31758_1253 hypothetical protein.
  
     0.772
Your Current Organism:
Dickeya chrysanthemi
NCBI taxonomy Id: 561229
Other names: D. chrysanthemi Ech1591, Dickeya chrysanthemi Ech1591, Dickeya dadantii Ech1591, Dickeya zeae Ech1591
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.