STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aaeXPFAM: protein of unknown function DUF1656; KEGG: eca:ECA0277 hypothetical protein. (67 aa)    
Predicted Functional Partners:
aaeB
Fusaric acid resistance protein conserved region; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.
 
    0.948
aaeA
Secretion protein HlyD family protein; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    0.893
mzrA
Conserved hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
  
     0.774
PC1_1588
PFAM: virulence-related outer membrane protein; KEGG: eca:ECA2764 outer membrane protein X.
  
     0.774
PC1_2041
TIGRFAM: DNA replication terminus site-binding protein; PFAM: site-binding protein DNA replication region; KEGG: eca:ECA2261 DNA replication terminus site-binding protein.
  
     0.772
PC1_1998
PFAM: protein of unknown function UPF0259; KEGG: eca:ECA2305 hypothetical protein.
  
     0.771
PC1_1066
KEGG: eca:ECA1166 hypothetical protein.
  
     0.770
PC1_3023
PFAM: SseB family protein; KEGG: eca:ECA3229 enhanced serine sensitivity protein SseB.
  
     0.769
PC1_1839
KEGG: eca:ECA2472 hypothetical protein.
  
     0.766
PC1_3496
TIGRFAM: phage shock protein G; KEGG: eca:ECA3661 phage shock protein G.
  
     0.765
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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