STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PC1_0524PFAM: protein of unknown function DUF1090; KEGG: eca:ECA0640 hypothetical protein. (129 aa)    
Predicted Functional Partners:
PC1_0523
PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA0639 hypothetical protein.
 
    0.930
mzrA
Conserved hypothetical protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
       0.791
PC1_0526
PFAM: SNARE associated Golgi protein; KEGG: eca:ECA0642 DedA family membrane protein.
       0.778
PC1_0522
KEGG: eca:ECA0638 hypothetical protein.
 
    0.775
PC1_0521
KEGG: eca:ECA0637 hypothetical protein.
 
    0.747
PC1_1063
Lipoprotein; KEGG: eca:ECA1163 lipoprotein.
  
    0.654
lpxT
Phosphoesterase PA-phosphatase related; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.
  
     0.624
PC1_0825
PFAM: fimbrial biogenesis outer membrane usher protein; KEGG: eca:ECA0942 putative outer membrane usher protein.
  
     0.610
PC1_2759
PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA3015 hypothetical protein.
 
    0.604
PC1_0926
PFAM: protein of unknown function DUF903; KEGG: eca:ECA1013 putative lipoprotein.
  
    0.597
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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