Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PC1_1925TIGRFAM: PTS system, mannose/fructose/sorbose family, IIC subunit; PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: eca:ECA2386 PTS system, mannose-specific IIC component. (265 aa)    
Predicted Functional Partners:
PC1_1924
TIGRFAM: PTS system, mannose/fructose/sorbose family, IID subunit; PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: eca:ECA2387 mannose-specific PTS system protein IID.
 0.999
PC1_1926
KEGG: eca:ECA2385 PTS system, mannose-specific IIAB component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIB subunit; PTS system, mannose/fructose/sorbose family, IIA subunit; PFAM: PTS system sorbose subfamily IIB component; PTS system fructose subfamily IIA component.
 
 0.999
PC1_3949
PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: seh:SeHA_C0686 PTS system, mannose-specific enzyme II, D component.
 
 0.987
PC1_3953
PFAM: PTS system fructose subfamily IIA component; KEGG: see:SNSL254_A0630 putative PTS system mannose-specific enzyme iiab.
 
 0.985
PC1_3951
Protein-N(pi)-phosphohistidine--sugar phosphotransferase; PFAM: PTS system sorbose subfamily IIB component; KEGG: set:SEN4301 PTS transport system, IIB component.
 
 
 0.932
PC1_0775
Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: cko:CKO_00377 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (HPr).
  
 
 0.909
PC1_2039
KEGG: eca:ECA2263 mannose-6-phosphate isomerase; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
  0.906
PC1_1317
Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase; KEGG: eca:ECA1439 phosphomannomutase.
     
  0.900
PC1_0351
PFAM: PfkB domain protein; KEGG: eca:ECA0364 aminoimidazole riboside kinase; Belongs to the carbohydrate kinase PfkB family.
    
  0.804
PC1_1005
PFAM: ROK family protein; KEGG: eca:ECA1107 fructokinase.
     
  0.800
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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