Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
PC1_1964PFAM: Aldose 1-epimerase; KEGG: eca:ECA2345 putative aldose 1-epimerase; Belongs to the glucose-6-phosphate 1-epimerase family. (289 aa)    
Predicted Functional Partners:
PC1_0773
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: eca:ECA0891 glucose-specific PTS system component.
  
  
  0.912
PC1_2495
KEGG: eca:ECA1805 glucose-specific PTS system IIBC components; TIGRFAM: PTS system, glucose-specific IIBC subunit; PTS system, glucose-like IIB subunint; PTS system, maltose and glucose-specific subfamily, IIC subunit; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein.
  
  
  0.911
PC1_1212
TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: eca:ECA1336 phosphoglucomutase.
   
 
 0.910
pgi
PFAM: phosphoglucose isomerase (PGI); KEGG: eca:ECA3979 glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.909
PC1_0012
PFAM: glycoside hydrolase family 1; KEGG: eca:ECA4432 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
PC1_0030
Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: eca:ECA4407 putative glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
PC1_0543
PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0662 6-phospho-beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
PC1_0743
Beta-glucosidase; PFAM: glycoside hydrolase family 1; KEGG: eca:ECA0859 beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
PC1_1327
PFAM: glycoside hydrolase family 1; KEGG: eca:ECA1451 glycosyl hydrolase; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
PC1_1348
PFAM: glycoside hydrolase family 1; KEGG: ent:Ent638_3965 glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 1 family.
     
  0.900
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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