Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PC1_1997Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family. (188 aa)    
Predicted Functional Partners:
PC1_1998
PFAM: protein of unknown function UPF0259; KEGG: eca:ECA2305 hypothetical protein.
  
    0.809
PC1_1996
PFAM: thioesterase superfamily protein; KEGG: eca:ECA2314 acyl-CoA thioester hydrolase.
       0.637
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
      
 0.516
PC1_1771
PFAM: protein of unknown function DUF343; KEGG: eca:ECA2555 hypothetical protein; Belongs to the UPF0434 family.
  
     0.447
PC1_1999
PFAM: protein of unknown function UPF0153; KEGG: sea:SeAg_B1413 hypothetical protein.
       0.402
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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