Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
PC1_4064PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA0188 PTS system, IIABC component. (462 aa)    
Predicted Functional Partners:
PC1_0773
TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: eca:ECA0891 glucose-specific PTS system component.
   0.944
PC1_0775
Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: cko:CKO_00377 phosphohistidinoprotein-hexose phosphotransferase component of PTS system (HPr).
  
 
 0.903
PC1_0742
Transcriptional antiterminator, BglG; PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: eca:ECA0858 putative beta-glucoside operon antiterminator.
 
 
 0.783
PC1_1347
Transcriptional antiterminator, BglG; PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: ent:Ent638_3966 transcriptional antiterminator, BglG.
 
 
 
 0.781
PC1_1328
Transcriptional antiterminator, BglG; PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: eca:ECA1452 putative beta-glucoside operon antiterminator.
 
 
 
 0.779
PC1_2440
Transcriptional antiterminator, BglG; PFAM: CAT RNA-binding domain protein; PRD domain protein; KEGG: eca:ECA1869 beta-glucoside operon antiterminator.
 
 
 0.779
PC1_0348
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
 
  
 0.738
PC1_4063
Mandelate racemase/muconate lactonizing protein; Has no detectable activity with D-mannonate and with a panel of 70 other acid sugars (in vitro), in spite of the conservation of the residues that are expected to be important for catalytic activity and cofactor binding. May have evolved a divergent function.
       0.419
PC1_1349
TIGRFAM: PTS system, beta-glucoside-specific IIABC subunit; PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: ent:Ent638_3964 PTS system, beta-glucoside-specific IIABC subunit.
 
 
0.414
PC1_3019
TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC; phosphotransferase system PTS EIIB protein; KEGG: eca:ECA3225 PTS system, alpha-glucoside-specific IIBC component.
 
    0.408
Your Current Organism:
Pectobacterium carotovorum
NCBI taxonomy Id: 561230
Other names: P. carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum PC1, Pectobacterium carotovorum subsp. carotovorum str. PC1, Pectobacterium carotovorum subsp. carotovorum strain PC1
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