STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB27463.1Gluconolactonase. (302 aa)    
Predicted Functional Partners:
SKB75955.1
Gluconokinase.
    
 0.937
SKB35592.1
Quinoprotein glucose dehydrogenase.
  
  
 0.881
SKB56900.1
Putative membrane-bound dehydrogenase domain-containing protein.
  
  
  0.858
SKB27469.1
Sugar phosphate isomerase/epimerase.
       0.780
SKB26428.1
Gluconolactonase.
  
  
 
0.668
SKB27473.1
XTP/dITP diphosphohydrolase.
       0.538
SKB51572.1
Aldo/keto reductase.
  
 
  0.529
SKB41237.1
Cytochrome c, mono-and diheme variants.
    
  0.410
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.