STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB31143.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (559 aa)    
Predicted Functional Partners:
SKB31151.1
uroporphyrinogen-III synthase.
       0.794
SKB31145.1
Protein of unknown function.
       0.785
SKB31713.1
Hypothetical protein.
  
     0.636
SKB35960.1
C-terminal domain of CHU protein family protein.
  
     0.626
SKB64749.1
Uncharacterized conserved protein YegL, contains vWA domain of TerY type.
  
     0.616
SKB27506.1
4-amino-4-deoxy-L-arabinose transferase.
  
     0.615
SKB75841.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.593
SKB27509.1
Hypothetical protein.
 
    0.591
SKB64683.1
Hypothetical protein.
  
     0.586
SKB31138.1
Dolichol-phosphate mannosyltransferase.
  
 
  0.580
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.