STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB31905.1Dolichyl-phosphate-mannose-protein mannosyltransferase. (494 aa)    
Predicted Functional Partners:
SKB64683.1
Hypothetical protein.
  
     0.700
SKB24806.1
Hypothetical protein.
  
     0.608
SKB48640.1
Hypothetical protein.
  
     0.582
SKB31143.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.570
SKB31896.1
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.561
SKB31871.1
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.558
SKB70459.1
Hypothetical protein.
  
     0.546
SKB85274.1
Outer membrane receptor for ferrienterochelin and colicins.
  
     0.537
SKB35960.1
C-terminal domain of CHU protein family protein.
  
     0.536
SKB25464.1
Hypothetical protein.
  
     0.512
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.