STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB39087.1Putative membrane protein. (176 aa)    
Predicted Functional Partners:
SKB39096.1
Protein SCO1/2.
 
    0.914
SKB39076.1
Hypothetical protein.
 
     0.859
SKB39111.1
Hypothetical protein.
       0.823
SKB53299.1
Protein SCO1/2.
    0.774
SKB47484.1
Protein SCO1/2.
    0.761
SKB39126.1
Cytochrome c oxidase subunit 3.
 
     0.717
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
    0.681
SKB39117.1
Cytochrome C oxidase subunit IV.
 
     0.662
SKB73315.1
Protein SCO1/2.
 
    0.651
SKB39366.1
Cytochrome c oxidase subunit 2.
 
    0.579
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.