STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB41127.1Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (765 aa)    
Predicted Functional Partners:
SKB39602.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 0.962
SKB39587.1
Prokaryotic molybdopterin-containing oxidoreductase family, membrane subunit.
  
 0.911
SKB71666.1
Glutamate synthase (NADH) large subunit.
  
 0.851
SKB62427.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.740
SKB26574.1
Ferredoxin subunit of nitrite reductase or a ring-hydroxylating dioxygenase.
   
 
 0.724
SKB39541.1
Hypothetical protein.
   
 
 0.708
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.708
SKB39270.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
    
 0.700
SKB48191.1
Adenylyltransferase and sulfurtransferase.
 
  
 0.690
SKB51275.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
     
 0.675
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
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