Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SKB41346.1 | SKB41484.1 | SAMN05660866_01342 | SAMN05660866_01352 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit alpha. | 0.900 |
| SKB41346.1 | SKB58225.1 | SAMN05660866_01342 | SAMN05660866_02274 | DNA polymerase-3 subunit alpha. | Single-strand DNA-binding protein. | 0.903 |
| SKB41346.1 | dnaX | SAMN05660866_01342 | SAMN05660866_02189 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| SKB41484.1 | SKB41346.1 | SAMN05660866_01352 | SAMN05660866_01342 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit alpha. | 0.900 |
| SKB41484.1 | SKB58225.1 | SAMN05660866_01352 | SAMN05660866_02274 | DNA polymerase-3 subunit alpha. | Single-strand DNA-binding protein. | 0.723 |
| SKB41484.1 | dnaX | SAMN05660866_01352 | SAMN05660866_02189 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.963 |
| SKB58217.1 | SKB58225.1 | SAMN05660866_02273 | SAMN05660866_02274 | Hypothetical protein. | Single-strand DNA-binding protein. | 0.757 |
| SKB58217.1 | SKB58232.1 | SAMN05660866_02273 | SAMN05660866_02275 | Hypothetical protein. | Hypothetical protein. | 0.539 |
| SKB58225.1 | SKB41346.1 | SAMN05660866_02274 | SAMN05660866_01342 | Single-strand DNA-binding protein. | DNA polymerase-3 subunit alpha. | 0.903 |
| SKB58225.1 | SKB41484.1 | SAMN05660866_02274 | SAMN05660866_01352 | Single-strand DNA-binding protein. | DNA polymerase-3 subunit alpha. | 0.723 |
| SKB58225.1 | SKB58217.1 | SAMN05660866_02274 | SAMN05660866_02273 | Single-strand DNA-binding protein. | Hypothetical protein. | 0.757 |
| SKB58225.1 | SKB58232.1 | SAMN05660866_02274 | SAMN05660866_02275 | Single-strand DNA-binding protein. | Hypothetical protein. | 0.621 |
| SKB58225.1 | dnaX | SAMN05660866_02274 | SAMN05660866_02189 | Single-strand DNA-binding protein. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.729 |
| SKB58225.1 | priA | SAMN05660866_02274 | SAMN05660866_03327 | Single-strand DNA-binding protein. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.750 |
| SKB58225.1 | rplU | SAMN05660866_02274 | SAMN05660866_00730 | Single-strand DNA-binding protein. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.610 |
| SKB58225.1 | rpsF | SAMN05660866_02274 | SAMN05660866_03329 | Single-strand DNA-binding protein. | SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA. | 0.710 |
| SKB58225.1 | rpsG | SAMN05660866_02274 | SAMN05660866_00029 | Single-strand DNA-binding protein. | Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family. | 0.669 |
| SKB58225.1 | rpsJ | SAMN05660866_02274 | SAMN05660866_00031 | Single-strand DNA-binding protein. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.633 |
| SKB58232.1 | SKB58217.1 | SAMN05660866_02275 | SAMN05660866_02273 | Hypothetical protein. | Hypothetical protein. | 0.539 |
| SKB58232.1 | SKB58225.1 | SAMN05660866_02275 | SAMN05660866_02274 | Hypothetical protein. | Single-strand DNA-binding protein. | 0.621 |
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