STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB66294.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
SKB66305.1
Hypothetical protein.
 
     0.779
SKB66287.1
Hypothetical protein.
 
     0.678
SKB51673.1
Hypothetical protein.
  
     0.662
SKB82400.1
Putative auto-transporter adhesin, head GIN domain.
  
     0.641
SKB82015.1
Hypothetical protein.
  
     0.638
SKB47889.1
Protein involved in gliding motility GldI.
  
     0.608
SKB66313.1
Hypothetical protein.
 
     0.600
SKB38368.1
Hypothetical protein.
  
     0.597
SKB66813.1
Hypothetical protein.
  
     0.543
SKB24676.1
Hypothetical protein.
  
     0.506
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.