STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB78168.1Trehalose 6-phosphate synthase /trehalose 6-phosphatase. (737 aa)    
Predicted Functional Partners:
SKB78175.1
Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family.
  
 0.988
SKB50864.1
4-alpha-L-fucosyltransferase glycosyl transferase group 56.
  
 0.865
SKB51572.1
Aldo/keto reductase.
   
    0.851
SKB57278.1
LysM domain-containing protein.
   
  
 0.839
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.836
SKB71313.1
Glycogen recognition site of AMP-activated protein kinase.
  
 0.836
SKB45313.1
Hypothetical protein.
   
    0.831
SKB30336.1
Maltose phosphorylase.
  
 0.801
SKB37968.1
Trehalose and maltose hydrolase (possible phosphorylase).
  
 0.801
SKB30344.1
Beta-phosphoglucomutase.
    
 0.794
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
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