STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKB86182.1RNA polymerase sigma-70 factor, ECF subfamily. (207 aa)    
Predicted Functional Partners:
SKB86219.1
Mechanosensitive ion channel.
 
     0.891
SKB86201.1
Hypothetical protein.
 
     0.889
SKB45019.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.762
SKB86430.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.760
SKB70471.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.752
SKB44978.1
RNA polymerase, sigma subunit, ECF family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.749
SKB64703.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.730
SKB86465.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.720
SKB24801.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.671
SKB57127.1
RNA polymerase sigma-70 factor, ECF subfamily.
  
     0.640
Your Current Organism:
Maribacter arcticus
NCBI taxonomy Id: 561365
Other names: DSM 23546, JCM 14790, KCTC 22053, M. arcticus, Maribacter arcticus Cho et al. 2008 emend. Weerawongwiwat et al. 2013, strain KOPRI 20941
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.